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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902199.1_cds_XP_016452201.1_46465
CDS Infomation

[gene=LOC107776790] [db_xref=GeneID:107776790] [protein=putative pectate lyase 2] [protein_id=XP_016452201.1] [location=complement(join(27685..27912,28430..28565,29246..29601,30167..30406))] [gbkey=CDS]
Sequence

ATGACTAATAATATTGGACCCGAATATAAGGTTACAGATCCTAGTGACGATCCCCTGAAC
CCTAAACCCGGAACTCTCAGATATGCGATGACACATATCCAAGGAAAGGTTTGGGTAACT
TTCCAAAGAGACATGACTATTAGGCTCCAAAATCCCCTCTTAGTTAGCAGTTTCGCTACC
ATTGATGGCCGTGGAGTTAAGGTTAACATTGCTGATGGTGCTTGTCTAATGCTCCAAAGG
GTAACAAATGTGATAATTCATGGTCTAAGAATCCACCATTGCAAGGCACAACCAGCATCA
ACAGTCTTGGGACCTGATAAGAAAATAGTAAATGTGGGTCCAGTGGATGGAGATGCAATT
AGAATGTTGACTTCTTCCAAGATTTGGATTGACCACAATACCCTTTTCGATTGTGAAGAT
GGTTTAATTGATGTTACTCGTGGTTCTACTGATATTACAATATCCAATAATTGGTTTAGG
ACCCAAAATAAGGTTATGTTATTAGGTCATGATGATGGATTTCTTAGAGACAAGAATATG
AAGGTTACTGTTGCATTCAATTATTTTGGTCCTAATTGCAACCAGAGAATGCCGAGGGTT
CGTCATGGATATGCACATGTGGTAAACAATCTATACGAAGGATGGGGAAACTACGCAATA
GGGGGGAGCATGAACCCTAGCATTAAGAGCCAAGCCAATTATTTTATTGCATCTAAAGGA
GGAAAGAAAGAGATCACATGGAGAAAGGAGGGTGGAGTTGGTGAAGTGTCATGGAATTTC
CAATCAGTTGAAGATGTATTTGAGAATGGAGCATCTTTCAGAGAATCGGGTTCGGGTCGT
GAGTCCGTGAAGCCAAACTATCTGCCAGATCAAGCTTTTCCAGTGGAAGATGGAAAAAAT
GTCAAGGCCTTGACTAGAAATGCTGGTGCTCTAAAATGTTCCACTACTTCTACCTGCTGA

Peptide Sequence

PEP ID

XP_016452201.1
PEP Infomation

PREDICTED: putative pectate lyase 2 [Nicotiana tabacum]
Sequence

MTNNIGPEYKVTDPSDDPLNPKPGTLRYAMTHIQGKVWVTFQRDMTIRLQNPLLVSSFAT
IDGRGVKVNIADGACLMLQRVTNVIIHGLRIHHCKAQPASTVLGPDKKIVNVGPVDGDAI
RMLTSSKIWIDHNTLFDCEDGLIDVTRGSTDITISNNWFRTQNKVMLLGHDDGFLRDKNM
KVTVAFNYFGPNCNQRMPRVRHGYAHVVNNLYEGWGNYAIGGSMNPSIKSQANYFIASKG
GKKEITWRKEGGVGEVSWNFQSVEDVFENGASFRESGSGRESVKPNYLPDQAFPVEDGKN
VKALTRNAGALKCSTTSTC

Transcript Sequence

Gene sequence data has not been registered.